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Series GSE19415 Query DataSets for GSE19415
Status Public on Mar 31, 2010
Title Expression data from primary ovine fetal turbinate cells infected with Orf Virus IA82 and deletion mutant OV-IA82Δ024
Platform organism Bos taurus
Sample organism Ovis aries
Experiment type Expression profiling by array
Summary Reverse genetics has been widely used to investigate function of viral genes. In the present study we investigated the gene expression profile of a primary ovine cell (OFTu) in response to infection with the wild type (OV-IA82) and deletion mutant virus (OV-IA82Δ024) aiming to determine possible functions for ORFV024 during ORFV infection.
We used microarray analysis to investigate gene expression profile of OFTu with ORFV OV-IA82 and OV-IA82Δ024.
 
Overall design OFTu cells were infected with each virus (m.o.i = 10) and RNA was extratect at 2 and 4 hours post-infection. cDNA was synthesized and hybridized with GeneChip Bovine Genome Array from Affymetrix. Gene expression profile were determined by comparing expression of cells infected with the deletion mutant virus with those infected with the wild type virus in each time point.
 
Contributor(s) Diel DG, Delhon G, Luo S, Flores EF, Drnevich J, Rock DL
Citation(s) 20147406
Submission date Dec 10, 2009
Last update date Dec 17, 2012
Contact name Diego G. Diel
E-mail(s) dgdiel@illinois.edu, diegodiel@yahoo.com.br
Organization name University of Illinois
Department Pathobiology
Street address 2001, S Lincoln Ave
City Urbana
State/province IL
ZIP/Postal code 61802
Country USA
 
Platforms (1)
GPL2112 [Bovine] Affymetrix Bovine Genome Array
Samples (4)
GSM482785 OFTu + OV-IA82 at 2 hpi
GSM482786 OFTu + OV-IA82 at 4 hpi
GSM482787 OFTu + OV-IA82Δ024 at 2 hpi
Relations
BioProject PRJNA121731

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE19415_RAW.tar 7.5 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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