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Series GSE19754 Query DataSets for GSE19754
Status Public on Mar 30, 2010
Title Transcriptome analysis of zebrafish mononuclear myogenic cells (zMNCs) during myogenic differentiation
Organism Danio rerio
Experiment type Expression profiling by array
Summary Analysis of the transcriptome of zebrafish mononuclear myogenic cells (zMNCs) during myogenic differentiation. The main goal is to identify the similarities of zMNC myogenic differentiation with that of mammalian myoblast differentiation. Critical time points were used to identify a switch from the activity of cell proliferation genes to myogenic structural genes.
 
Overall design 15-20 adult zebrafish dorsal skeletal muscles were isolated at each of 6 distinct time points (day 0, day 1, day 4, day 7, day 10, day 14) in replicates.
 
Contributor(s) Kho AT, Alexander MS, Kunkel LM
Citation(s) 21337346
Submission date Jan 05, 2010
Last update date Jan 25, 2018
Contact name Alvin T. Kho
E-mail(s) alvin_kho@hms.harvard.edu
Phone 617-919-2182
Organization name Boston Children's Hospital
Department Informatics Program
Street address 320 Longwood Avenue
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platforms (1)
GPL1319 [Zebrafish] Affymetrix Zebrafish Genome Array
Samples (32)
GSM493388 zMNCs, day 0, replicate A, batch 1
GSM493389 zMNCs, day 0, replicate B, batch 1
GSM493390 zMNCs, day 10, replicate A, batch 1
Relations
BioProject PRJNA122225

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE19754_RAW.tar 69.7 Mb (http)(custom) TAR (of CEL)
Raw data provided as supplementary file
Processed data included within Sample table

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