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Series GSE19846 Query DataSets for GSE19846
Status Public on Oct 15, 2010
Title Demethyl fructiculin A (SCO-1) induces apoptosis by inducing reactive oxygen species in mitochondria
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Demethyl fructiculin A is a diterpenoid quinone component of the exudates from Salvia corrugata (SCO-1) leafes. SCO-1 was recently reported to induce anoikis in mammalian cell lines via a molecular mechanism involving the presence of the membrane scavenging receptor CD36. However, experiments performed with cells lacking CD36, showed that SCO-1 was able to induce apoptosis also via alternate pathways. To contribute to a better characterization of the molecular mechanisms underlining the cytotoxic activity of SCO-1, we decided to pursue an unbiased pharmacogenomic approach by generating the gene expression profile of GBM TICs subjected to the administration of SCO-1 and comparing it with that of control cells exposed to the solvent. With this strategy we hypothesized to highlight those pathways and biological processes unlashed by SCO-1.
Using this approach we unveiled that the main mechanism responsible for the SCO-1 pro-apoptotic effect is superoxide generation in mitochondria and that this molecule has potential chemotherapeutic properties that should be further investigated in GBM xenotransplant models.
 
Overall design To get an insight on the biological processes and pathways elicited by Demethyl fructiculin A (SCO-1), we undertake an unbiased genomic approach in order to identify genes deregulated by SCO-1.
Cells were treated with 9.3 μg/ml concentration (IC50 at 48h) or vehicle alone (DMSO) and kept in a humidified 5% CO2 atmosphere at 37°C for the indicated time period (24 or 48 hours).
After 24 hours of exposure of glioblastoma tumor initiating cells (GBM TICs) to SCO-1, we found the deregulation of genes belonging to the Glutathione metabolism pathway and of those belonging to the biological processes related to the response to stress and chemical stimulus.
 
Contributor(s) Monticone M, Bisio A, Daga A, Giannoni P, Maffei M, Pfeffer U, Romeo F, Quarto R, Corte G, Castagnola P
Citation(s) 20683904
Submission date Jan 12, 2010
Last update date Jul 26, 2018
Contact name Massimiliano Monticone
E-mail(s) massimiliano.monticone@istge.it
Organization name IRCCS AOU San Martino – IST, Genova
Lab S.S. Biofisica e Citometria
Street address Largo R. Benzi, 10
City Genova (GE)
ZIP/Postal code 16132
Country Italy
 
Platforms (1)
GPL6244 [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version]
Samples (4)
GSM495732 DMSO_24h
GSM495733 DMSO_48h
GSM495734 SCO1_24h
Relations
BioProject PRJNA122071

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE19846_RAW.tar 15.9 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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