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Series GSE200820 Query DataSets for GSE200820
Status Public on May 17, 2022
Title Calorie restriction and calorie dilution have different impacts on body fat, metabolism, behavior and hypothalamic gene expression
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Caloric restriction is a robust intervention to increase life span. Giving less food (CR), or allowing free access to diluted diet with indigestible components (CD) are two methods to impose restriction. CD does not generate the same lifespan effect as CR. We compared responses of C57BL/6 mice to equivalent levels of CR and CD. Our study calorie restriction and calorie two restriction methods different effect on hypothamic gene expression pattern, RNA-seq was performed using hypothalamus of mice with 2 methods treatment as well as control group.
 
Overall design There are three groups in total,control group (CT), calorie restriction group (CR) and dietary dilution group (CD) were exposed to the corresponding experimental diets for 3 months. All animals used in this study were C57BL/6J male mice that were purchased at age 8 weeks from Charles River Laboratories. The mice were single housed in a specific pathogen free facility at 60% humidity with a 12-hour light /12-hour dark circle (light, 7:30 am to 7:30 pm). All the mice were under ad libitum access to water and standard diet (D12450B) in the first 30 days as the baseline period.Afterwards, mice were divided into 3 groups - control group (CT) (D12450B diet), calorie restriction group (CR) and dietary dilution group (CD) were exposed to the corresponding experimental diets for 3 months. CR mice were pair fed the baseline diet to the absorbed intake of ad lib fed CD mice fed the high cellulose diet. The energy intake of CD group was calculated daily by weighing the food that went missing from the hopper (plus any food items recovered from the bedding). This was calculated for each mouse. We then provided paired mice from the CR group with the corresponding amount of standard diet adjusted for the absorption efficiency and dilutent. The food was provided just before lights off on that day in the evening. CT mice were under ad libitum supply of the baseline diet throughout. In the end of the experiment, mice were sacrificed and hypothalamus part were collected for RNA extraction and sequencing.
 
Contributor(s) Liu X, Jin Z, Summers S, Derous D, Li M, Li B, Li L, Speakman JR
Citation(s) 35584669
Submission date Apr 14, 2022
Last update date Aug 16, 2022
Contact name John Roger Speakman
E-mail(s) j.speakman@abdn.ac.uk
Phone 01625108671
Organization name Institute of Genetics and Developmental Biology, Chinese Academy of Sciences
Street address No. 1 West Beichen Road
City Beijing
ZIP/Postal code 100101
Country China
 
Platforms (1)
GPL23479 BGISEQ-500 (Mus musculus)
Samples (17)
GSM6044477 control_hypo_1
GSM6044478 control_hypo_2
GSM6044479 control_hypo_3
Relations
BioProject PRJNA826867

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Supplementary file Size Download File type/resource
GSE200820_CRvCD_normalised_counts_table.txt.gz 1.5 Mb (ftp)(http) TXT
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Processed data are available on Series record

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