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Series GSE20149 Query DataSets for GSE20149
Status Public on Apr 12, 2010
Title Microarray studies on effect of Pneumocystis carinii infection on global gene expression in alveolar macrophages
Organism Rattus norvegicus
Experiment type Expression profiling by array
Summary With a filter of false-discovery rate less than 0.1 and fold change greater than 1.5, 115 genes were found to be up- and 137 were down-regulated in alveolar macrophages during Pneumocystis carinii infection.
 
Overall design Total RNA samples from 4 each of normal, dexamethasone-treated, and Pneumocystis carinii-infected Sprague-Dawley rats were analyzed by the Affymetrix GeneChip RG-U34A
 
Contributor(s) Lee C, Cheng B
Citation(s) 20377877
Submission date Feb 02, 2010
Last update date Feb 21, 2017
Contact name Chao-Hung Lee
E-mail(s) chlee@iupui.edu
Phone 3172742596
Fax 3172780643
Organization name Indiana University
Department Pathology & Lab Medicine
Street address 1120 South Dr., FH 419
City Indianapolis
State/province IN
ZIP/Postal code 46202
Country USA
 
Platforms (1)
GPL85 [RG_U34A] Affymetrix Rat Genome U34 Array
Samples (12)
GSM505315 Normal AM rep1
GSM505316 Normal AM rep2
GSM505317 Normal AM rep3
Relations
BioProject PRJNA125573

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE20149_RAW.tar 56.0 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

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