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Series GSE2019 Query DataSets for GSE2019
Status Public on Dec 21, 2004
Title Microarray Based Comparison of three Amplification Methods For Nanogram Amounts of Total RNA
Organism Mus musculus
Experiment type Expression profiling by array
Summary Two T7 based methods One round of Amplification (Affymetrix) and Two round of Amplification were compared to two Ribo-SPIA based systems, RiboSPIA and pico Ribo SPIA systems. Data for Pico-RiboSPIA are listed here.
All Hybridisation were performed using Affymetrix Mouse 430-2 gene chips. Data were all scaled to 500.
For 12 chips performed with pico Ribo SPIA the scaling factor average was 2.0 +/- 0.3, background intensities 74.4 +/- 12.7 , noise 3.9 +/- 0.6, rawQ 2.5 +/- 0.3
Keywords: ordered
Contributor(s) Singh R, Maganti RJ, Jabba SV, Wang M, Deng G, Heath J, Kurn N, Wangemann P
Citation(s) 15613496
Submission date Nov 28, 2004
Last update date Feb 11, 2019
Contact name Philine Wangemann
Phone 785-532-4863
Organization name Kansas State University
Department Anatomy and Physiology
Lab Cell Physiology Laboratory
Street address 1600 Dension Avenue
City Manhattan
State/province KS
ZIP/Postal code 66506
Country USA
Platforms (1)
GPL1261 [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array
Samples (12)
GSM36470 mouse Kidney pRS 10 ng -1
GSM36471 mouse Kidney pRS 10 ng -2
GSM36472 mouse Kidney pRS 10 ng -3
BioProject PRJNA91841

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE2019_RAW.tar 68.5 Mb (http)(custom) TAR (of CEL)
Raw data provided as supplementary file

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