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Series GSE20208 Query DataSets for GSE20208
Status Public on Oct 08, 2010
Title Interleukin-16-knock-out bone-marrow derived macrophages response to Escherichia coli lipopolysaccharide (LPS)
Organism Mus musculus
Experiment type Expression profiling by array
Summary We have employed whole genome microarray expression profiling to identify differently expressed genes following stimulation of interleukin-16-knock-out bone-marrow derived macrophages with Escherichia coli lipopolysaccharide (LPS). Macrophages were stimulated with LPS (100 ng/ml) for 6 hours and a signature was identified that distinguished between infected and control samples. Expression of several genes from this signature was quantified in the same RNA samples by real-time PCR, confirming the predicted macrophage response pattern.
 
Overall design Gene expression in macrophages was measured at 6 hours after stimulation Three independent experiments were performed.
 
Contributor(s) Desnues B, Mège J
Citation(s) 21042409
Submission date Feb 05, 2010
Last update date May 10, 2018
Contact name Benoit Desnues
E-mail(s) benoit.desnues@univmed.fr
Organization name Faculté de Médecine de la Timone
Department URMITE UMR CNRS 6236
Street address 27 boulevard Jean Moulin
City Marseille
ZIP/Postal code 13385 cedex 05
Country France
 
Platforms (1)
GPL4134 Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Feature Number version)
Samples (6)
GSM506877 IL-16 knock-out BMDM_control_1_6h
GSM506878 IL-16 knock-out BMDM_control_2_6h
GSM506879 IL-16 knock-out BMDM_control_3_6h
This SubSeries is part of SuperSeries:
GSE20210 Role of interleukin-16 in macrophage responses to Tropheryma whipplei and lipopolysaccharide
Relations
BioProject PRJNA129801

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE20208_RAW.tar 53.6 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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