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Series GSE20396 Query DataSets for GSE20396
Status Public on Feb 19, 2010
Title Expression data of LCM-dissected retina layers
Organism Mus musculus
Experiment type Expression profiling by array
Summary We have analyzed the transcript expression in different LCM-dissected cell layers isolated from mouse retinas adapted to light or dark in order to identify transcripts potentially targetted by retinal microRNAs which are regulated in response to light treatment
 
Overall design Retinas were isolated from adult mice adapted to light or dark following LCM dissection of photoreceptors (ONL+OS/IS), inner nuclear layer (INL), inner plexiform layer (IPL), ganglion cell layer (GCL) and whole retina samples. Experiments were performed in duplicates. Total RNA was extracted and hybridization on Affymatrix array was performed.
 
Contributor(s) Krol J, Busskamp V, Roska B, Filipowicz W
Citation(s) 20478254
Submission date Feb 17, 2010
Last update date Mar 04, 2019
Contact name Jacek Krol
E-mail(s) jacek.krol@fmi.ch
Phone 00-41-61-6974128
Fax 00-41-61-6973976
Organization name Friedrich Miescher Institute for Biomedical Research
Department Epigenetics
Lab W. Filipowicz Group
Street address Maulbeerstrasse 66
City Basel
ZIP/Postal code 4058
Country Switzerland
 
Platforms (1)
GPL6246 [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]
Samples (20)
GSM510983 ONL+OS/IS LA replicate 1
GSM510984 ONL+OS/IS LA replicate 2
GSM510985 INL LA repicate 1
Relations
BioProject PRJNA125525

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE20396_RAW.tar 65.4 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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