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Series GSE20649 Query DataSets for GSE20649
Status Public on Apr 14, 2010
Title MicroRNA-Directed siRNA Biogenesis in Caenorhabditis elegans
Organism Caenorhabditis elegans
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary C.elegans small RNAs from HA::ALG-1, HA::ALG-2 and HA::RDE-1 IP and rde-1 mutants
 
Overall design Small RNAs were cloned from transgenic or mutant C. elegans adults. Sequencing was performed using 454 and Illumina platforms.
 
Citation(s) 20386745
Submission date Mar 05, 2010
Last update date May 15, 2019
Contact name Eugene Berezikov
E-mail(s) e.berezikov@umcg.nl
Phone +31 50 361 73 00
Organization name University Medical Center Groningen
Department European Research Institute for the Biology of Ageing
Street address Antonius Deusinglaan 1
City Groningen
ZIP/Postal code 9713AV
Country Netherlands
 
Platforms (2)
GPL9085 454 GS FLX (Caenorhabditis elegans)
GPL9269 Illumina Genome Analyzer II (Caenorhabditis elegans)
Samples (5)
GSM518367 ALG1IP
GSM518368 ALG2IP
GSM518369 RDE1IP
Relations
SRA SRP002317
BioProject PRJNA124873

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE20649_RAW.tar 16.6 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Processed data included within Sample table
Raw data are available in SRA

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