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Series GSE20722 Query DataSets for GSE20722
Status Public on Mar 01, 2011
Title Influence of alkyl-phospholipids on the gene expression profile of immortalized keratinocytes HaCaT
Organism Homo sapiens
Experiment type Expression profiling by array
Summary New alkyl-phospholipids (APLs) that are structurally derived from the platelet-activating factor are promising candidates for anticancer treatment. After the incorporation into cell membranes, APLs are able to interfere with a wide variety of key enzymes implicated in cell growth, motility, invasion and apoptosis. Besides the prototype edelfosine, we presented a novel group of APLs, glycosidated phospholipids that efficiently inhibit cell proliferation. Two members of this group, Ino-C2-PAF and Glc-PAF, display high efficacy and low cytotoxicity in immortalized non-tumorigenic skin keratinocyte cell line HaCaT. However, the influence of APLs on the transcription of the whole genome is still unknown. Here, using Agilent cDNA microarray technology, we compared global gene expression profiles of HaCaT cells treated with edelfosine, Ino-C2-PAF or Glc-PAF with the profile of control cells.
 
Overall design The influence of APLs on the transcriptional profile of immortalized keratinocytes (HaCaT) was analyzed treating HaCaT cells with respectively 5 µM Ino-C2-PAF, Glc-PAF and edelfosine for 24 h. Control cells were left untreated. Three independent experiments were performed for each condition.
 
Contributor(s) Semini G, Danker K, Klein A
Citation(s) 21681147
Submission date Mar 10, 2010
Last update date Jan 23, 2019
Contact name Geo Semini
E-mail(s) geosemini@yahoo.com
Organization name Charité - Universitätmedizin
Department Institute for Biochemie
Street address Oudenarderstrasse 16
City Berlin
ZIP/Postal code 13347
Country Germany
 
Platforms (1)
GPL6480 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Probe Name version)
Samples (12)
GSM520257 HaCaT_Control_Block_A
GSM520258 HaCaT_Control_Block_B
GSM520259 HaCaT_Control_Block_C
Relations
BioProject PRJNA125067

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE20722_RAW.tar 107.1 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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