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Series GSE20881 Query DataSets for GSE20881
Status Public on Jul 19, 2010
Title Colon biopsies from Crohns patients and healthy controls
Organism Homo sapiens
Experiment type Expression profiling by array
Summary The aim of this study was to investigate differential intestinal gene expression in patients with Crohn's disease (CD) and controls. 172 biopsies from CD and control subjects were studied. Endoscopic biopsies were taken at ileocolonoscopy from five specific anatomical locations including the terminal ileum for RNA extraction.
 
Overall design Biopsies from one of four anatomic locations, from healthy controls and treated (with non-biologic standard of care) or untreated CD patients.
 
Contributor(s) Noble CL, Abbas AR, Lees CW, Cornelius J, Toy K, Modrusan Z, Clark HF, Arnott ID, Penman ID, Satsangi J, Diehl L
Citation(s) 20848455
Submission date Mar 15, 2010
Last update date Apr 12, 2017
Contact name Alex Abbas
E-mail(s) abbas@gene.com
Organization name Genentech, Inc.
Department Bioinformatics
Street address 1 DNA Way
City South San Francisco
State/province CA
ZIP/Postal code 94080
Country USA
 
Platforms (1)
GPL1708 Agilent-012391 Whole Human Genome Oligo Microarray G4112A (Feature Number version)
Samples (172)
GSM522094 sigmoid colon biopsy from healthy subject (GSM282904)
GSM522095 sigmoid colon biopsy from healthy subject (GSM282910)
GSM522096 sigmoid colon biopsy from healthy subject (GSM282855)
Relations
BioProject PRJNA124721

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE20881_RAW.tar 1.7 Gb (http)(custom) TAR (of TXT)
GSE20881_phenotype_data2.txt.gz 5.6 Kb (ftp)(http) TXT
Processed data included within Sample table

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