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Series GSE20968 Query DataSets for GSE20968
Status Public on Jan 01, 2011
Title Hepatocyte-nuclear-factor-4a promotes gut neoplasia in mice and protects against the production of reactive oxygen species
Organism Mus musculus
Experiment type Expression profiling by array
Summary Hepatocyte-nuclear-factor-4α (Hnf4α) is a transcription factor that controls epithelial cell polarity and maturation during embryogenesis. Hnf4α conditional deletion during post-natal development results in minor consequences on intestinal epithelium integrity but promotes activation of the Wnt/β-catenin pathway. Here we show that Hnf4α does not act as a tumor suppressor gene but is crucial to promote gut tumorigenesis in mice. Polyp multiplicity in ApcMin mice that lacks Hnf4α is suppressed in comparison to littermate ApcMin controls. Analysis of microarray gene expression profiles from mice lacking Hnf4α in the intestinal epithelium identifies its novel function in regulating the expression of reactive oxygen species (ROS) detoxifying genes. This role is supported with the demonstration that HNF4α is functionally involved in the protection against spontaneous and 5-fluorouracil chemotherapy-induced production of intracellular ROS in colorectal cancer cell lines. The analysis of a colorectal cancer patient cohort establishes that HNF4α is significantly up-regulated at both gene transcript and protein levels in tumors relative to adjacent benign epithelial resections. Several genes involved in ROS neutralization are also up-regulated in correlation with HNF4α expression. All together, the findings point to the nuclear receptor HNF4α as a potential therapeutic target to eradicate aberrant epithelial cell resistance to ROS production during intestinal tumorigenesis.
 
Overall design HNF4alpha was conditionally knockout in the mouse epithelial intestine with the 12.4-kb VillinCRE. A total of 3 control and 3 mutant littermates individuals were sacrificed at 7 months of age. The distal jejunum was harvested and Total RNA was isolated from each individuals. Each RNA sample was independently used to generate probes to screen affymetrix chips.
 
Contributor(s) Darsigny M, Babeu J, Carrier J, Seidman EG, Gendron F, Lévy E, Perreault N, Boudreau F
Citation(s) 21062980
Submission date Mar 19, 2010
Last update date Feb 11, 2019
Contact name Francois Boudreau
E-mail(s) francois.boudreau@usherbrooke.ca
Phone 819-820-6876
Fax 819-564-5320
Organization name University of Sherbrooke
Department Anatomy and Cell Biology
Lab Boudreau
Street address 3001 12e ave Nord
City Sherbrooke
State/province Quebec
ZIP/Postal code J1H 5N4
Country Canada
 
Platforms (1)
GPL1261 [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array
Samples (6)
GSM524183 HNF4fxVilCRE_CTRL1
GSM524184 HNF4fxVilCRE_CTRL2
GSM524185 HNF4fxVilCRE_CTRL3
Relations
BioProject PRJNA124415

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE20968_RAW.tar 19.6 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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