NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE21001 Query DataSets for GSE21001
Status Public on Mar 25, 2010
Title Infection of MK2 cells with monkeypox virus
Organism Macaca mulatta
Experiment type Expression profiling by array
Summary Orthopox viruses, including monkeypox, multiply intracellularly and induce numerous changes in host genes expression. The virus target mainly humoral host response, and simultaneously, exploits other genes and functions to reproduce effectively. The goal of this experiment is to identify those host genes and functions that are essential for monkeypox virus replication.
 
Overall design Mock infected control cells were treated and incubated identically to time point arms, except for virus exposure. Two time points of cells infected with monkeypox virus were harvested at 3, 7 hours post infection, and gene expression was assessed using microarray in all arms. The experiment was done in triplicate.
 
Contributor(s) Alkhalil A, Ibrahim S
Citation(s) 20667104
Submission date Mar 22, 2010
Last update date Jul 18, 2012
Contact name Abdulnaser Alkhalil
E-mail(s) naser.alkhalil@us.army.mil
Organization name USAMRIID
Street address 1425 Porter st.
City Frederick
State/province MD
ZIP/Postal code 21702
Country USA
 
Platforms (1)
GPL3535 [Rhesus] Affymetrix Rhesus Macaque Genome Array
Samples (9)
GSM524843 a- Control
GSM524844 a- 3 hpi
GSM524845 a- 7 hpi
Relations
BioProject PRJNA125747

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE21001_RAW.tar 47.8 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap