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Series GSE21172 Query DataSets for GSE21172
Status Public on Apr 20, 2010
Title Developmental Regulation and Individual Differences of Neuronal Epigenomes in the Prefrontal Cortex
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We report global distribution of trimethylated Histone H3 Lysine 4 (H3K4me3) in human prefrontal cortex neurons at different ages
 
Overall design Neuronal nuclei from human prefrontal cortex were isolated by FACS. Regions marked by H3K4me3 were identified by chromatin immunoprecipiation followed by deep sequencing.
 
Contributor(s) Akbarian S, Weng Z
Citation(s) 20421462
Submission date Apr 01, 2010
Last update date May 15, 2019
Contact name Hennady Shulha
Organization name Boston University
Department BME
Street address 44 Cummington st
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
 
Platforms (1)
GPL9052 Illumina Genome Analyzer (Homo sapiens)
Samples (14)
GSM529959 0.5 yr old H3K4me3_NeuN+_rep1 #1
GSM529960 0.58 yr old H3K4me3_NeuN+_rep1 #2
GSM529961 0.75 yr old H3K4me3_NeuN+_rep1 #3
Relations
SRA SRP002334
BioProject PRJNA125799

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE21172_RAW.tar 382.5 Mb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp
Processed data provided as supplementary file
Raw data are available in SRA

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