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Series GSE21535 Query DataSets for GSE21535
Status Public on Apr 29, 2010
Title Effect of lactation on transcriptomic expression in bovine adipose tissue
Organism Bos taurus
Experiment type Expression profiling by array
Summary The objective was to study the transcriptomic changes in adipose tissue in the early stages of lactation, specifically in Bos Taurus, Holstein dairy cattle as a function of milk production and genetic merit.
Chip quality backgrounds averaged below 50 units, and 3’/5’ bias on control genes < 2.0. Correlations among replicates were > 0.85.
 
Overall design The design was a simple paired sampling, with time (30 d prepartum and 14 d postpartum as the sampling times. There was no dietary manipulation. Animals were all first calving Holstein heifers, all raised on the same farm on the same diet
 
Contributor(s) Sumner JM, Vierck J
Citation(s) 21183046
Submission date Apr 27, 2010
Last update date Sep 10, 2015
Contact name John P McNamara
E-mail(s) mcnamara@wsu.edu
Phone 5093354113
Fax 5093354246
Organization name Washington State University
Department Animal Sciences
Street address 233 Clark Hall
City Pullman
State/province WA
ZIP/Postal code 991646351
Country USA
 
Platforms (1)
GPL2112 [Bovine] Affymetrix Bovine Genome Array
Samples (22)
GSM537869 adipose tissue prepartum cow 331 -30 d 082407
GSM537870 adipose tissue postpartum cow 331 +14 d 082407
GSM537871 adipose tissue prepartum cow 338 -30 d 082407
Relations
BioProject PRJNA125943

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE21535_RAW.tar 45.6 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file
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