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| Status |
Public on Mar 23, 2023 |
| Title |
Transcription factor induction of vascular blood stem cell niches in vivo [scRNA-Seq.Whole-tail] |
| Organism |
Danio rerio |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We report single cell gene expression data for caudal tail tissue cells collected from embryos at 72 hours post fertilization (hpf).
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| Overall design |
Wild type embryos were homogenized, filtered, and then 25,000 live cells were FACS sorted into PBS. 5,000 cells were then encapsulated using the inDrops method and libraries were prepared for sequencing.
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| Contributor(s) |
Hagedorn EJ, Yang S, Zon LI |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Mar 10, 2023 |
| Last update date |
Mar 25, 2023 |
| Contact name |
Leonard Zon |
| E-mail(s) |
zon@enders.tch.harvard.edu
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| Organization name |
Boston Children's Hospital
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| Department |
Oncology/Hematology
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| Street address |
1 Blackfan Circle
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| City |
Boston |
| State/province |
MA |
| ZIP/Postal code |
02115 |
| Country |
USA |
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| Platforms (1) |
| GPL21741 |
Illumina HiSeq 4000 (Danio rerio) |
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| Samples (1) |
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| This SubSeries is part of SuperSeries: |
| GSE124151 |
Transcription factor induction of vascular blood stem cell niches in vivo |
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| Relations |
| BioProject |
PRJNA943252 |
