NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE23311 Query DataSets for GSE23311
Status Public on Jul 31, 2010
Title DNA Methylation Analysis in Human Chorionic Villus and Maternal Blood Cells
Organism Homo sapiens
Experiment type Methylation profiling by array
Summary Comparative analysis of DNA methylation in 12 human chorionic villus samples and 12 human maternal blood cell samples
 
Overall design We performed a genome wide analysis of DNA methylation first trimester CVS samples and gestational age matched MBCs. We analyzed DNA samples obtained from 12 CVS samples and 12 MBC samples. Data were generated using two high-throughput approaches: the Infinium “humanmethylation27” platform marketed by Illumina and a custom Agilent-based platform. We then compared these data with genome wide transcription data for the same tissues.

This Series covers only the Illumina HumanMethylation27 part of the study.
 
Contributor(s) Chu T, Peters D
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jul 29, 2010
Last update date Jan 02, 2015
Contact name Tianjiao Chu
E-mail(s) chutx@upmc.edu
Organization name Magee Womens Research Institute
Street address 204 Craft Ave
City Pittsburgh
State/province PA
ZIP/Postal code 15213
Country USA
 
Platforms (1)
GPL8490 Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2)
Samples (48)
GSM572116 MBC 1 unmethylated CpG dinucleotides
GSM572117 MBC 1 methylated CpG dinucleotides
GSM572118 MBC 2 unmethylated CpG dinucleotides
Relations
BioProject PRJNA131193

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE23311_RAW.tar 5.8 Mb (http)(custom) TAR
GSE23311_non-normalized.txt.gz 6.5 Mb (ftp)(http) TXT
Processed data included within Sample table
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap