NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE23752 Query DataSets for GSE23752
Status Public on Aug 24, 2010
Title Induced overexpression of Pdx1 and Ngn3 in a mouse ES cell-derived endoderm population induces pancreatic differentiation
Organism Mus musculus
Experiment type Expression profiling by array
Summary Induced overexpression of Pdx1 in activin-induced endoderm population resulted in the upregulation of pancreas-related genes such as insulin 1 and 2 at day 20. To enhance the developmental progression from the pancreatic bud to the formation of the endocrine lineages, we next expressed neurogenin3 (Ngn3) together with Pdx-1. Induced overexpression of Pdx1 together with Ngn3 dramatically increased Insulin 1 mRNA by day 9 differentiation. The levels of insulin 1 mRNA present in the induced EBs represented approximately 100 % of that found in insulinoma cell line, betaTC6.
We also confirmed insulin and C-peptide staining by immunohistochemistry. These cells process and secrete insulin and respond to various insulin secretagogues. These inductive effects were restricted to c-kit+ endoderm enriched EB-derived populations suggesting that Pdx1/Ngn3 functions at the level of pancreatic specification of endoderm in this model. Microarray analysis showed that Pdx1/Ngn3 regulated the expression of a broad spectrum of pancreatic endocrine cell-related genes.
 
Overall design On day 4 of a multiday differentiation protocol, EBs were dissociated and cultured in serum-free growth medium supplemented with differentiation facots, with or without Dox (1 ug/ml). On day 6, EBs were replated on gelatin in 12-well low-cluster dishes (Nunc) to obtain non-adherent floating EBs with or without Dox (1 ug/ml) and cultured out to day 13, at which time RNA was harvested for microarray analysis.
 
Contributor(s) Kubo A, Stull R, Takeuchi M, Bonham K, Gouon-Evans V, Iwano M, Sho M, Saito Y, Keller G, Snodgrass R
Citation(s) 21931641
Submission date Aug 23, 2010
Last update date Mar 25, 2013
Contact name Robert A Stull
E-mail(s) bobstullca@gmail.com
Phone (650)244-9990
Organization name VistaGen Therapeutics
Department Genomics
Street address 384 Oyster Point Blvd, Suite #8
City South San Francisco
State/province CA
ZIP/Postal code 94080
Country USA
 
Platforms (1)
GPL2897 GE Healthcare/Amersham Biosciences CodeLinkā„¢ Mouse Whole Genome Bioarray
Samples (10)
GSM586113 1. Day 13 dox (-)
GSM586114 2. Day 13 dox (-)
GSM586115 3. Day 13 dox (+)
Relations
BioProject PRJNA130741

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE23752_RAW.tar 17.7 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap