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Series GSE24171 Query DataSets for GSE24171
Status Public on Oct 18, 2010
Title Prostate Cancer Field Effect
Organism Homo sapiens
Experiment type Expression profiling by array
Summary In this study, comparison of gene expression profiles in benign epithelia from men with prostate cancer to those of men without prostate cancer reveal differences in several genes associated with prostate cancer.
 
Overall design Custom Agilent 44K whole human genome expression oligonucleotide microarrays were used to profile benign epithelium from prostate needle biopsies from 15 men with high grade(Gleason 8-10) prostate cancer and 14 age- and BMI-matched controls. All samples were laser-capture microdissected and total RNA isolated and amplified prior to hybridization against a common reference pool of prostate tumor cell lines
 
Contributor(s) Risk MC, Knudsen BS, Coleman IM, Dumpit RF, Kristal AR, LeMeur N, Gentleman RC, True LD, Nelson PS, Lin DW
Citation(s) 20935156
Submission date Sep 16, 2010
Last update date Feb 22, 2018
Contact name Ilsa Coleman
E-mail(s) icoleman@fredhutch.org
Phone 206-667-1703
Organization name Fred Hutchinson Cancer Center
Department Human Biology
Lab Peter Nelson
Street address 1100 Fairview Ave N, E2-112
City Seattle
State/province WA
ZIP/Postal code 98109
Country USA
 
Platforms (2)
GPL4133 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
GPL10931 Agilent-016011 Corey Whole Human Genome Oligo Microarray 4x44K (Feature Number version)
Samples (29)
GSM594758 benign epithelium from age- and BMI-matched control prostate needle biopsy #1
GSM594759 benign epithelium from age- and BMI-matched control prostate needle biopsy #2
GSM594760 benign epithelium from age- and BMI-matched control prostate needle biopsy #3
Relations
BioProject PRJNA130093

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE24171_RAW.tar 409.0 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table
Processed data provided as supplementary file
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