|
| Status |
Public on Jan 10, 2011 |
| Title |
Dynamic combinatorial interactions of RUNX1 and cooperating partners regulates megakaryocytic differentiation in cell line models |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
20959602 |
| Submission date |
Oct 18, 2010 |
| Last update date |
May 15, 2019 |
| Contact name |
Ram Jaschek |
| E-mail(s) |
ramijaschek@gmail.com
|
| Organization name |
Weizmann Institute of Science
|
| Street address |
P.O Box 26
|
| City |
Rechovot |
| ZIP/Postal code |
71600 |
| Country |
Israel |
| |
|
| Platforms (2) |
| GPL5188 |
[HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] |
| GPL9115 |
Illumina Genome Analyzer II (Homo sapiens) |
|
| Samples (22)
|
| GSM610331 |
K562-NIS |
| GSM610332 |
K562-RUNX1 |
| GSM610333 |
K562-TPA-NIS |
| GSM610334 |
K562-TPA-RUNX1 |
| GSM610335 |
K562-TPA-GATA1 |
| GSM610336 |
K562_TPA-FOS |
| GSM610337 |
K562_TPA-FOSB |
| GSM610338 |
K562-TPA-H3K27ME3 |
| GSM610339 |
K562-TPA-H3K4ME1 |
| GSM610340 |
Expression in K562 cells following TPA induction with a control structure - rep 1 |
| GSM610341 |
Expression in K562 cells following TPA induction with a RUNX1 KO structure - rep 1 |
| GSM610342 |
Expression in K562 cells - rep 1 |
| GSM610343 |
Expression in K562 cells following TPA induction - rep 1 |
| GSM610344 |
Expression in K562 cells - rep 2 |
| GSM610345 |
Expression in K562 cells following TPA induction - rep 2 |
| GSM610346 |
Expression in K562 cells following TPA induction with a control structure - rep 2 |
| GSM610347 |
Expression in K562 cells following TPA induction with a RUNX1 KO structure - rep 2 |
| GSM610348 |
Expression in K562 cells following TPA induction with a control structure - rep 3 |
| GSM610349 |
Expression in K562 cells following TPA induction with a RUNX1 KO structure - rep 3 |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE24777 |
Regulation of Megakaryocytic differentiation in Cell Line Models by Dynamic Combinatorial Interactions of RUNX1 with Its Cooperating Partners |
| GSE24778 |
Expresssion data in K562 cells, before and after TPA induction and including a RUNX1 knockout construct or a control structure |
|
| Relations |
| BioProject |
PRJNA132223 |
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