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| Status |
Public on Dec 31, 2011 |
| Title |
mRNA microarray analysis on young adult zebrafish exposed to benzene, toluene, formaldehyde and a BTF mix |
| Organism |
Danio rerio |
| Experiment type |
Expression profiling by array
|
| Summary |
In order to evaluate the identification of genes and pathways, the global gene expression profiles were assessed in response to three chemicals (benzene (B), toluene (T), formaldehyde (F)) individually and as a BTF mix on zebrafish. We performed whole genome DNA microarray experiments with subsequent quantitative analysis conducted on selected genes.
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| Overall design |
We used synchronized zebrafish populations exposed to B, T, F or a BTF mix, and whole genome microarrays to screen for global changes in zebrafish transcription profiles. Young adults of zebrafish were selected for RNA extraction and hybridization on Affymetrix microarrays.
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| Contributor(s) |
Choi J, Lee M, Chon T |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Oct 20, 2010 |
| Last update date |
Jan 25, 2018 |
| Contact name |
jinhee choi |
| E-mail(s) |
jinhchoi@uos.ac.kr
|
| Phone |
82-2-2210-5622
|
| Organization name |
University of Seoul
|
| Department |
College of Urban Science
|
| Lab |
Faculty of Environmental Engineering
|
| Street address |
90 Jeonnong-dong, Dongdaemun-gu
|
| City |
seoul |
| ZIP/Postal code |
130-743 |
| Country |
South Korea |
| |
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| Platforms (1) |
| GPL1319 |
[Zebrafish] Affymetrix Zebrafish Genome Array |
|
| Samples (5)
|
| GSM611225 |
young adult_DMSO exposed_rep1 |
| GSM611226 |
young adult_24hr Benzene exposure_rep1 |
| GSM611227 |
young adult_24hr Toluene exposure_rep1 |
| GSM611228 |
young adult_24hr Formaldehyde exposure_rep1 |
| GSM611229 |
young adult_24hr BTF mix exposure_rep1 |
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| This SubSeries is part of SuperSeries: |
| GSE24923 |
mRNA microarray analysis on young adult Caenorhabditis elegans, Drosophila melanogaster, and Danio rerio exposed to benzene, toluene, and formaldehyde |
|
| Relations |
| BioProject |
PRJNA133437 |
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