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Series GSE25249 Query DataSets for GSE25249
Status Public on Nov 12, 2010
Title BI Human Reference Epigenome Mapping Project: Characterization of chromatin modification by ChIP-Seq in human subject
Project Roadmap Epigenomics
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Genome scale characterization of chromatin modification, RNA expression, and cytosine methylation in a diverse panel of primary human cells and tissues, stem cells, and iPS cells derived from deidentified human subjects

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For data usage terms and conditions, please refer to:
http://www.drugabuse.gov/funding/funding-opportunities/nih-common-fund/epigenomics-data-access-policies
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Overall design BI Human Reference Epigenome Mapping Project - samples and experiments will continue to be added to this study over the course of the project.

EDACC Genboree Page:
http://genboree.org/java-bin/project.jsp?projectName=XML%20Submissions%2FBroad%2FSTUDY%2FEDACC.3212
Web link http://0-www-ncbi-nlm-nih-gov.brum.beds.ac.uk/geo/roadmap/epigenomics/
 
Contributor(s) Bernstein BE, Meissner A
Citation missing Has this study been published? Please login to update or notify GEO.
BioProject PRJNA34535
Submission date Nov 09, 2010
Last update date Dec 03, 2018
Contact name BROAD INSTITUTE
E-mail(s) rharris1@bcm.tmc.edu
Organization name Broad Institute
Street address -
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
 
Platforms (1)
GPL9115 Illumina Genome Analyzer II (Homo sapiens)
Samples (24)
GSM621737 ChIP-Seq analysis of H3K4me3 in human hSKM cells; Lib:MC:20100222:03--ChIP:MC:20100216:03:hSKM:H3K4Me3
GSM621738 ChIP-Seq analysis of H3K9ac in human hSKM cells; Lib:MC:20100222:06--ChIP:MC:20100216:06:hSKM:H3K9Ac
GSM621739 ChIP-Seq analysis of H3K36me3 in human hSKM cells; Lib:MC:20100222:04--ChIP:MC:20100216:04:hSKM:H3K36Me3

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE25249_RAW.tar 8.4 Gb (http)(custom) TAR (of BED, WIG)
Processed data provided as supplementary file
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