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Series GSE25313 Query DataSets for GSE25313
Status Public on Nov 13, 2010
Title Effect of PDE4 inhibition on host gene expression of Mtb-infected mouse lungs.
Organism Mus musculus
Experiment type Expression profiling by array
Summary Global gene expressions of Mtb-infected mouse lungs were compared between with and without PDE4 inhibitor treatment. A lot of host genes are differentially expressed 21d and 28d post-Mtb infection. PDE4 inhibitor, however, downregulate 10% of genes among those and genes differentially regulated by PDE4 inhibitor are mainly involved immune response.
 
Overall design Total RNA was isolated from Mtb-infected mouse lungs with or without CC-3052 (25 mg/kg/day) using Trizol reagent and gene profile was analyed using Affymetrix mouse ST 1.0
 
Contributor(s) Koo M, Guo H, Kaplan G
Citation(s) 21364878
Submission date Nov 12, 2010
Last update date Mar 04, 2019
Contact name Mi-Sun Koo
E-mail(s) koomi@umdnj.edu
Phone 9738543226
Fax 972854322
Organization name University of Medicine and Dentistry of New Jersey
Department Public Health Research Institute
Street address 225 Warren Street, W250Q
City Newark
State/province NJ
ZIP/Postal code 07103
Country USA
 
Platforms (1)
GPL6246 [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]
Samples (47)
GSM622710 Lung_Uninfected-1_14d
GSM622711 Lung_Uninfected-2_14d
GSM622712 Lung_Uninfected-3_14d
Relations
BioProject PRJNA134885

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE25313_14d_21d_28d_Anova.txt.gz 3.7 Mb (ftp)(http) TXT
GSE25313_42d_Anova.txt.gz 2.2 Mb (ftp)(http) TXT
GSE25313_RAW.tar 201.7 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table
Processed data are available on Series record

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