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Series GSE25570 Query DataSets for GSE25570
Status Public on Dec 13, 2010
Title Ovary small RNA
Project modENCODE
Organism Drosophila melanogaster
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary We sequenced small RNA from total RNA samples in two siRNA-pathway mutants in fly ovaries.

This submission comes from a modENCODE project. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf
 
Overall design Small RNAs were sequenced from D. melanogaster Canton S ovaries. Raw sequences were clipped by 3' linker sequences recognition, and select clipped sequences longer than 18 nt.
Web link http://0-www-ncbi-nlm-nih-gov.brum.beds.ac.uk/geo/info/ENCODE.html
 
Contributor(s) Lai E, Okamura K
Citation(s) 21135122
BioProject PRJNA168994
Submission date Nov 23, 2010
Last update date May 15, 2019
Contact name Nicolas Robine
E-mail(s) robinen@mskcc.org
Organization name Memorial Sloan Kettering Cancer Center
Department Developmental Biology
Lab Eric Lai
Street address 1275 York Avenue, Box 252
City New York
State/province NY
ZIP/Postal code 10065
Country USA
 
Platforms (1)
GPL9058 Illumina Genome Analyzer (Drosophila melanogaster)
Samples (2)
GSM628271 r2d2[1] ovary total RNA
GSM628272 ago2[414] ovary total RNA
Relations
SRA SRP004630

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary data files not provided
SRA Run SelectorHelp
Raw data are available in SRA
Processed data included within Sample table
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