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Series GSE25906 Query DataSets for GSE25906
Status Public on Dec 10, 2010
Title Transcriptional Profiling of Human Placentas from Pregnancies Complicated by Preeclampsia Reveals Disregulation of Sialic Acid Acetylesterase and Immune Signaling Pathways
Organism Homo sapiens
Experiment type Expression profiling by array
Summary The placenta plays an important role as a regulator of fetal nutrition and growth throughout development and placental factors contribute to gestational abnormalities such as preeclampsia. This study describes the genome-wide gene expression profiles of a large (n=60) set of human placentas in order to uncover gene expression patterns associated with preeclampsia. In addition to confirming changes in expression of soluble factors associated with preeclampsia such as sFLT1 (soluble fms-like tyrosine kinase-1), sENG (soluble endoglin), and INHA (inhibin alpha), we also find changes in immune-associated signaling pathways, offering a potential upstream explanation for the shallow trophoblast invasion and inadequate uterine remodeling typically observed in pathogenesis of preeclampsia. Notably, we also find evidence of preeclampsia-associated placental upregulation of sialic acid acetylesterase (SIAE), a gene functionally associated with autoimmune diseases.
 
Overall design 23 preeclamptic, and 37 control placentas included in this study were collected during the years of 2004-2008 and hybridized in two batches to microarrays. Samples were randomized across arrays to control for array and batch variability.
 
Contributor(s) Tsai S, Hardison NE, James AH, Motsinger-Reif AA, Bischoff SR, Thames BH, Piedrahita JA
Citation(s) 21183218
Submission date Dec 07, 2010
Last update date Nov 13, 2015
Contact name Shengdar Tsai
Organization name North Carolina State University
Street address 4700 Hillsborough St.
City Raleigh
State/province NC
ZIP/Postal code 27604
Country USA
 
Platforms (1)
GPL6102 Illumina human-6 v2.0 expression beadchip
Samples (60)
GSM635904 human.placenta.006
GSM635905 human.placenta.008
GSM635906 human.placenta.012
Relations
BioProject PRJNA135777

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE25906_RAW.tar 5.8 Mb (http)(custom) TAR
GSE25906_non-normalized.txt.gz 18.8 Mb (ftp)(http) TXT
GSE25906_normalized.txt.gz 22.3 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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