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Series GSE26345 Query DataSets for GSE26345
Status Public on Mar 11, 2011
Title Diurnal changes of HDAC3, Rev-erbα, NCoR and Pol II recruitment to the mouse liver genome and of H3K9Ac
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We reported a diurnal changes in the recruitment of HDAC3, Rev-erbα, NCoR and Pol II to the mouse liver genome as well as H3K9 acetylation in vivo at ZT10 and ZT22.
 
Overall design ChIP-Seq profiling of HDAC3, Rev-erbα, NCoR and Pol II binding and H3K9Ac in mouse liver harvested at 2 different times (ZT10 and ZT22) of the day
 
Contributor(s) Feng D, Lazar MA
Citation(s) 21393543, 22474260
Submission date Dec 29, 2010
Last update date May 15, 2019
Contact name Tao Liu
E-mail(s) tao.liu@roswellpark.org
Phone 7168451300
Organization name Roswell Park Comprehensive Cancer Institute
Department Biostatistics and Bioinformatics
Street address Elm and Carlton St
City Buffalo
State/province NY
ZIP/Postal code 14263
Country USA
 
Platforms (1)
GPL9250 Illumina Genome Analyzer II (Mus musculus)
Samples (18)
GSM647022 HDAC3 ChIP at ZT10-1
GSM647023 HDAC3 ChIP at ZT10-2
GSM647024 HDAC3 ChIP at ZT10-3
Relations
SRA SRP008783
BioProject PRJNA136929

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE26345_RAW.tar 17.5 Gb (http)(custom) TAR (of SAM)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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