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Series GSE26899 Query DataSets for GSE26899
Status Public on Dec 31, 2016
Title Characterization of gene expression profiles of gastric cancer in the Korea University cohort
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Clinical heterogeneity of gastric cancer reflected in unequal outcome of treatment is poorly defined in molecular level, and molecular subtypes and their associated biomarkers have not been established to improve prognostification and treatment of gastric cancer. Using microarray technologies, we analyzed gene expression profiling data from gastric cancer patients and uncovered potential prognostic subtypes and identify gene expression signature associated with prognosis and response to adjuvant chemotherapy.
 
Overall design Primary gastric adenocarcinoma and Surrounding normal fresh frozen tissues were used for microarray. All the tissues were obtained after curative resection after pathologic confirm at Korea University Guro Hospital. Microarray experiment and data analysis were done at Department of Systems Biology, MDACC with DNA microarray (Illumina human V3).
 
Contributor(s) Lee J, Oh S
Citation(s) 29725014
Submission date Jan 27, 2011
Last update date Jul 29, 2019
Contact name Sangbae Kim
E-mail(s) sangbkim22@gmail.com
Organization name Baylor Colleage of Medicine
Department HGSC
Street address 1 Baylor plaza
City Houston
State/province TX
ZIP/Postal code 77030
Country USA
 
Platforms (1)
GPL6947 Illumina HumanHT-12 V3.0 expression beadchip
Samples (108)
GSM662374 Gastric tumor tissue KG004C
GSM662375 Gastric Surrounding normal tissue KG008N
GSM662376 Gastric tumor tissue KG009C
This SubSeries is part of SuperSeries:
GSE26942 Characterization of gene expression profiles of gastric cancer
Relations
BioProject PRJNA142165

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE26899_GC_KoreaUniv_ClinicalInformation.txt.gz 787 b (ftp)(http) TXT
GSE26899_GC_KoreaUniv_ClinicalInformation_adjuvant_chemo.txt.gz 895 b (ftp)(http) TXT
GSE26899_RAW.tar 6.2 Mb (http)(custom) TAR
GSE26899_non-normalized.txt.gz 18.8 Mb (ftp)(http) TXT
Processed data included within Sample table

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