|
| Status |
Public on Oct 11, 2006 |
| Title |
ENCODE: two phosphorylation states of RNAP II ChIP-chip from HeLa cells |
| Project |
Pilot ENCODE
|
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
Genome binding/occupancy profiling by genome tiling array
|
| Summary |
Two phosphorylation states of RNAPII in HeLa cells
Keywords: ChIP-chip
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| |
|
| Overall design |
Study of RNAPII binding patterns to ENCODE regions. 3 arrays using 8wg16 antibody, hypophosphoryated PolII, 3 arrays using 4H8 antibody, phosphorylated PolII CTD, and 6 input DNA arrays.
|
| Web link |
http://0-www-ncbi-nlm-nih-gov.brum.beds.ac.uk/projects/geo/info/ENCODE.html
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| |
|
| Contributor(s) |
Brodsky A, Meyer C, Swinburne I, Hall G, Keenan B, Liu X, Fox E, Silver P |
| Citation(s) |
16086846 |
| BioProject |
PRJNA63421 |
| Submission date |
Jun 02, 2005 |
| Last update date |
Mar 25, 2019 |
| Contact name |
Alexander Brodsky |
| E-mail(s) |
alex_brodsky@brown.edu
|
| Phone |
401-444-1649
|
| Organization name |
Rhode Island Hospital/Brown University
|
| Department |
MCB
|
| Lab |
Brodsky lab
|
| Street address |
593 Eddy St.
|
| City |
PROVIDENCE |
| State/province |
RI |
| ZIP/Postal code |
02903 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL570 |
[HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array |
| GPL2138 |
Affymetrix ENCODE Tiling Array - SENSE |
|
| Samples (18)
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