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Series GSE27380 Query DataSets for GSE27380
Status Public on Feb 27, 2012
Title The acute milk yield response to frequent milking in early lactation is mediated by genes transiently regulated by milk removal.
Organism Bos taurus
Experiment type Expression profiling by array
Summary Milking dairy cows four times daily (4X) instead of twice daily (2X) during early lactation stimulates an increase in milk yield that partly persists through late lactation; however, the mechanisms behind this response are unknown. We hypothesized that the acute mammary response to regular milkings would be transient and would involve different genes from those that may be specifically regulated in response to 4X. Nine multiparous cows were assigned at parturition to unilateral frequent milking (UFM; 2X of the left udder half, 4X of the right udder half). Mammary biopsies were obtained from both rear quarters at 5 days in milk (DIM), immediately after 4X glands had been milked (Experiment 1; n = 4 cows), or 2.5 h after both udder halves had last been milked (Experiment 2; n = 5 cows). Affymetrix GeneChip® Bovine Genome Arrays were used to measure gene expression. Eight hundred and fifty five genes were differentially expressed in mammary tissue between 2X vs. 4X glands of cows in experiment 1 (FDR ≤ 0.05), whereas none were differentially expressed in experiment 2 using the same criterion. We conclude that there is an acute transcriptional response to milk removal, but 4X milking did not elicit differential expression of unique genes. Therefore, there does not appear to be a sustained transcriptional response to 4X milking on day 5 of lactation. Using a differential expression plot of data from both experiments, as well as qRT-PCR, we identified at least two genes that may be responsive to both milk removal and to 4X milking. Therefore, the milk yield response to 4X milking may be mediated by genes that are acutely regulated by removal of milk from the mammary gland.
 
Overall design 8 samples from 4 cows in experiment 1; 6 samples from 3 cows in experiment 2
 
Contributor(s) Wall EH, Bond JP, McFadden TB
Citation(s) 22028429
Submission date Feb 17, 2011
Last update date Dec 17, 2012
Contact name Emma Hull Wall
E-mail(s) emma.wall@uvm.edu
Phone 802-318-1731
Organization name University of Vermont
Department Medicine
Street address 89 Beaumont Ave
City Burlington
State/province VT
ZIP/Postal code 05405
Country USA
 
Platforms (1)
GPL2112 [Bovine] Affymetrix Bovine Genome Array
Samples (14)
GSM677069 expt. 1 mammary gland_control_rep1
GSM677070 expt. 1 mammary gland_milk removed 3.5h_rep1
GSM677071 expt. 1 mammary gland_control_rep2
Relations
BioProject PRJNA137019

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE27380_RAW.tar 32.3 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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