NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE27958 Query DataSets for GSE27958
Status Public on Jul 09, 2012
Title Expression profile of Chicken Early Yolksac Endodermal Tissues
Organism Gallus gallus
Experiment type Expression profiling by array
Summary A major role of yolk sac endoderm is the uptake of lipids and other constituents from the yolk and transfer of these components into the embryonic circulation. The molecular basis of the initial step of this regionalization has largely remained unclear. Using chick as a model system, we generated high-quality transcriptomic datasets of different stages of the yolksac endoderm and analyzed their molecular heterogeneity.
 
Overall design Two independent samples of total RNA were isolated from yolk sac endodermal tissues on embryonic day 1, 2, 3, and 4. 5 μg of RNA from each sample (total of 8 samples) were used to screen Affymetrix Chicken Genome Array without an amplification step.
 
Contributor(s) Nakazawa F, Cantas A, Jakt M, Guojun S
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Mar 14, 2011
Last update date Jul 10, 2012
Contact name Fumie Nakazawa
Organization name Center for Developmental Biology, RIKEN
Lab Early Embryogenesis
Street address 2-2-3 Minatojima-minamimachi, Chuo-ku
City Kobe
ZIP/Postal code 650-0047
Country Japan
 
Platforms (1)
GPL3213 [Chicken] Affymetrix Chicken Genome Array
Samples (8)
GSM691407 Yolksac endoderm_Day1_1
GSM691408 Yolksac endoderm_Day1_2
GSM691409 Yolksac endoderm_Day2_1
Relations
BioProject PRJNA137743

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE27958_RAW.tar 26.4 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap