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Series GSE28452 Query DataSets for GSE28452
Status Public on Oct 17, 2013
Title Induction of trophoblast stem cells from embryonic stem cells by forced repression of Oct3/4.
Organism Mus musculus
Experiment type Expression profiling by array
Summary To characterize the transdifferentiation of embryonic stem (ES) cells into trophoblast stem (TS) cells triggered by forced repression of Oct3/4, we performed whole-genome expression analysis after tetracycline (Tet)-induced knockout of Oct3/4.
 
Overall design A Tet-inducible Oct3/4 knockout ES cell line ZHBTc4 was treated with Tet for 4 days in the presence of FGF4 and mouse embryonic fibroblasts (MEFs). A total of 21 samples from Day 0 to Day 4 were analyzed in three biological replicates.
 
Contributor(s) Adachi K, Nikaido I, Ueda HR, Niwa H
Citation(s) 24120664
Submission date Apr 07, 2011
Last update date Mar 06, 2018
Contact name Itoshi NIKAIDO
E-mail(s) itoshi.nikaido@riken.jp
Organization name RIKEN
Department Center for Biosystems Dynamics Research
Lab Laboratory for Bioinformatics Research
Street address 2-1 Hirosawa
City Wako
State/province Saitama
ZIP/Postal code 351-0198
Country Japan
 
Platforms (1)
GPL6096 [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [transcript (gene) version]
Samples (21)
GSM703171 Oct3/4KO Day0 biological rep1
GSM703172 Oct3/4KO Day0 biological rep2
GSM703173 Oct3/4KO Day0 biological rep3
This SubSeries is part of SuperSeries:
GSE28455 Sox2-regulatory networks in embryonic and trophoblast stem cells
Relations
BioProject PRJNA143233

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE28452_RAW.tar 534.6 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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