|
| Status |
Public on May 23, 2012 |
| Title |
A Genome-wide DNA Methylation Study in Colorectal Carcinoma |
| Organism |
Homo sapiens |
| Experiment type |
Methylation profiling by array
|
| Summary |
Genome wide DNA methylation profiling of tumor and surrounding healthy colonic mucosa from patients with colorectal carcinoma. The Illumina Infinium 27k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across 27,578 CpG loci covering 14,475 genes.
|
| |
|
| Overall design |
Samples included a total of 48 paired normal and tumor samples from 24 patients. The paired samples were put on the same chip.
|
| |
|
| Contributor(s) |
Kibriya MG, Raza M, Jasmine F, Roy S, Paul-Brutus R, Rahaman R, Dodsworth C, Rakibuz-Zaman M, Kamal M, Ahsan H |
| Citation(s) |
21699707 |
| Submission date |
May 23, 2011 |
| Last update date |
Aug 19, 2019 |
| Contact name |
Muhammad Ghulam Kibriya |
| E-mail(s) |
kibriya@uchicago.edu
|
| Organization name |
The University of Chicago
|
| Department |
Health Studies
|
| Street address |
900 E 57th Street
|
| City |
Chicago |
| ZIP/Postal code |
60637 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL8490 |
Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2) |
|
| Samples (48)
|
|
| Relations |
| BioProject |
PRJNA141653 |
Less...
More...