|
| Status |
Public on Aug 19, 2011 |
| Title |
Integrative regulatory mapping indicates that the RNA-binding protein HuR (ELAVL1) couples pre-mRNA processing and mRNA stability |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
Other
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
21723170 |
| Submission date |
Jun 07, 2011 |
| Last update date |
May 15, 2019 |
| Contact name |
Neelanjan Mukherjee |
| E-mail(s) |
nm29@duke.edu
|
| Phone |
919-684-1632
|
| Organization name |
Duke University
|
| Department |
Institute for Genome Sciences & Policy
|
| Street address |
101 Science Drive
|
| City |
Durham |
| State/province |
NC |
| ZIP/Postal code |
27708 |
| Country |
USA |
| |
|
| Platforms (3) |
| GPL5175 |
[HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version] |
| GPL5188 |
[HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] |
| GPL9052 |
Illumina Genome Analyzer (Homo sapiens) |
|
| Samples (13)
|
| GSM738173 |
HuR ribonucleoprotein complex immunoprecipitation, biological replicate 1 |
| GSM738174 |
HuR ribonucleoprotein complex immunoprecipitation, biological replicate 2 |
| GSM738175 |
HuR ribonucleoprotein complex immunoprecipitation, biological replicate 3 |
| GSM738176 |
Mock ribonucleoprotein complex immunoprecipitation, biological replicate 1 |
| GSM738177 |
Mock ribonucleoprotein complex immunoprecipitation, biological replicate 2 |
| GSM738178 |
Mock ribonucleoprotein complex immunoprecipitation, biological replicate 3 |
| GSM738179 |
HuR siRNA knockdown, biological replicate 1 |
| GSM738180 |
HuR siRNA knockdown, biological replicate 2 |
| GSM738181 |
HuR siRNA knockdown, biological replicate 3 |
| GSM738182 |
Mock siRNA knockdown, biological replicate 1 |
| GSM738183 |
Mock siRNA knockdown, biological replicate 2 |
| GSM738184 |
Mock siRNA knockdown, biological replicate 3 |
| GSM738185 |
HuR PAR-CLIP |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE29778 |
HuR (ELAVL1) RIP-chip and knockdown exon array |
| GSE29779 |
Integrative regulatory mapping indicates that the RNA-binding protein HuR (ELAVL1) couples pre-mRNA processing and mRNA stability [sequence data] |
|
| Relations |
| BioProject |
PRJNA141053 |
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