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Series GSE31284 Query DataSets for GSE31284
Status Public on Oct 01, 2012
Title Histone H3K9 and H3K14 acetylation mark active enhancers and promoters together with bivalent promoters in mouse embryonic stem cells
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Transcription regulation in pluripotent embryonic stem (ES) cells is a complex process that involves multitude of regulatory layers, one of which is post-translational modification of histones. Here we have investigated the genome-wide occurrence of two histone marks, acetylation of histone H3K9 and K14 (H3K9ac and H3K14ac), in mouse ES cells. We demonstrate genome-wide that H3K9ac and H3K14ac show very high correlation.
 
Overall design Examination of H3K9ac and H3K14ac in mES cells
 
Contributor(s) Tora L
Citation(s) 22920947
Submission date Aug 09, 2011
Last update date May 15, 2019
Contact name Krishanpal Karmodiya
E-mail(s) krish@igbmc.fr, laszlo@igbmc.fr
Organization name Institut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC)
Street address 1 rue Laurent Fries / BP 10142
City Strasbourg
ZIP/Postal code 67404
Country France
 
Platforms (1)
GPL9185 Illumina Genome Analyzer (Mus musculus)
Samples (4)
GSM775313 mES-H3K9ac
GSM775314 mES-H3K14ac-13HH3
GSM775315 mES-H3K14ac-7G8
Relations
SRA SRP008271
BioProject PRJNA145861

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE31284_RAW.tar 1.3 Gb (http)(custom) TAR (of BED, WIG)
SRA Run SelectorHelp
Processed data provided as supplementary file
Raw data are available in SRA

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