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Series GSE31734 Query DataSets for GSE31734
Status Public on Aug 30, 2011
Title Mtb-mediated host transcriptional reponse is strain-specific
Organism Mus musculus
Experiment type Expression profiling by array
Summary CDC1551 induced more vigorous immune response in murine bone marrow derived macrophage (BMM). In contrast, in HN878-infected cells, host transcriptional response was delayed but lasted longer.
HN878 induced more genes involved in host lipid metabolism than CDC1551 did.
 
Overall design Murine bone marrow derived macrophages were infected with M. tuberculosis CDC1551 or HN878 up to 24 h. Total RNA was processed for microarray and global gene expression was read.
 
Contributor(s) Koo M
Citation(s) 22280836
Submission date Aug 29, 2011
Last update date Oct 31, 2019
Contact name Mi-Sun Koo
E-mail(s) koomi@umdnj.edu
Phone 9738543226
Fax 972854322
Organization name University of Medicine and Dentistry of New Jersey
Department Public Health Research Institute
Street address 225 Warren Street, W250Q
City Newark
State/province NJ
ZIP/Postal code 07103
Country USA
 
Platforms (1)
GPL6246 [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]
Samples (18)
GSM787736 BMM without infection 6h rep-1
GSM787737 BMM without infection 6h rep-2
GSM787738 BMM without infection 6h rep-3
Relations
BioProject PRJNA145429

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE31734_Anova.txt.gz 2.6 Mb (ftp)(http) TXT
GSE31734_RAW.tar 73.5 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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