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Series GSE32148 Query DataSets for GSE32148
Status Public on Apr 05, 2012
Title DNA methylation in peripheral blood from individuals with Crohns' disease or ulcerative colitis and normal controls
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary Genome wide DNA methylation profiling of Crohn's disease, ulcerative colitis, and normal peripheral blood samples. The Illumina Infinium HumanMethylation450 BeadChip v1.1 was used to obtain DNA methylation profiles across 482,421 CpGs in peripheral blood samples. Samples came from 17 Crohn's disease affected, 11 ulcerative colitis affected, and 20 normal individuals. Within these samples were three twin sets discordant for Crohn's disease and three twin sets discordant for ulcerative colitis.
 
Overall design Bisulfite converted DNA from the 48 samples were hybridized to the Illumina Infinium HumanMethylation450 BeadChip v1.1
 
Contributor(s) Kellermayer R, Harris RA
Citation(s) 22467598
Submission date Sep 15, 2011
Last update date Mar 22, 2019
Contact name R. Alan Harris
E-mail(s) rharris1@bcm.edu
Organization name Baylor College of Medicine
Department Molecular and Human Genetics
Street address 1 Baylor Plaza
City Houston
State/province TX
ZIP/Postal code 77030
Country USA
 
Platforms (1)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (48)
GSM796660 Crohn's disease peripheral blood 1A
GSM796661 normal peripheral blood 1B
GSM796662 normal peripheral blood 2A
This SubSeries is part of SuperSeries:
GSE32149 DNA methylation in Crohns' disease and ulcerative colitis
Relations
BioProject PRJNA154949

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE32148_RAW.tar 183.1 Mb (http)(custom) TAR
GSE32148_matrix_processed_peripheralBlood.txt.gz 72.7 Mb (ftp)(http) TXT
GSE32148_matrix_signal_peripheralBlood.txt.gz 121.4 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record
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