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Series GSE32568 Query DataSets for GSE32568
Status Public on Dec 08, 2011
Title Gene expression comparison of wild-type and IL15ko thymic NKT cells
Organism Mus musculus
Experiment type Expression profiling by array
Summary Semi-invariant natural killer T (NKT) cells are thymus-derived innate lymphocytes that modulate microbial and tumour immunity as well as autoimmune diseases. These immunoregulatory properties of NKT cells are acquired during their development. Much has been learnt regarding the molecular and cellular cues that promote NKT cell development, yet how these cells are maintained in the thymus and the periphery and how they acquire functional competence are incompletely understood. We found that IL-15 induced several Bcl-2 family survival factors in thymic and splenic NKT cells in vitro. Yet, IL15-mediated thymic and peripheral NKT cell survival critically depended on Bcl-xL expression. Additionally, IL-15 regulated thymic developmental stage 2 (ST2) to ST3 lineage progression and terminal NKT cell differentiation. Global gene expression analyses and validation revealed that IL-15 regulated Tbx21 (T-bet) expression in thymic ST3 NKT cells. The loss of IL15-dependent T-bet expression resulted in poor expression of IFN-γ and several NK cell receptors in NKT cells. Taken together, our findings reveal a critical role for IL-15 in NKT cell survival, which is mediated by Bcl-xL, and effector differentiation, which is regulated by T-bet.
 
Overall design Gene expression was measured in NKT cells sorted from pooled thymi of wild-type (3 replicates) or IL-15 deficient (2 replicates) mice.
 
Contributor(s) Gordy LE, Flyak AI, Joyce S
Citation(s) 22084435
Submission date Oct 03, 2011
Last update date Jul 19, 2017
Contact name Joyce Sebastian
E-mail(s) sebastian.joyce@vanderbilt.edu
Phone 615-322-1472
Organization name Vanderbilt University School of Medicine
Department Department of Microbiology and Immunology
Street address A-4223 Medical Centre North
City Nashville
State/province TN
ZIP/Postal code 37232
Country USA
 
Platforms (1)
GPL13912 Agilent-028005 SurePrint G3 Mouse GE 8x60K Microarray (Feature Number version)
Samples (5)
GSM807198 B6 thymic NKT 1
GSM807199 B6 thymic NKT 2
GSM807200 B6 thymic NKT 3
Relations
BioProject PRJNA147009

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE32568_RAW.tar 23.6 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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