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Series GSE32600 Query DataSets for GSE32600
Status Public on Nov 01, 2011
Title Distal airway stem cells yield alveoli in vitro and during lung regeneration following H1N1 influenza infection (colony)
Organism Mus musculus
Experiment type Expression profiling by array
Summary The extent of lung regeneration following catastrophic damage and the potential role of adult stem cells in such a process remains obscure. Sublethal infection of mice with an H1N1 influenza virus related to that of the 1918 pandemic triggers massive airway damage followed by apparent regeneration. We show here that p63-expressing stem cells in the bronchiolar epithelium undergo rapid proliferation after infection and radiate to interbronchiolar regions of alveolar ablation. Once there, these cells assemble into discrete, Krt5+ pods and initiate expression of markers typical of alveoli. Gene expression profiles of these pods suggest that they are intermediates in the reconstitution of the alveolar-capillary network eradicated by viral infection. The dynamics of this p63-expressing stem cell in lung regeneration mirrors our parallel findings that defined pedigrees of human distal airway stem cells assemble alveoli-like structures in vitro and suggests new therapeutic avenues to acute and chronic airway disease.
 
Overall design 3 colonies fron control and H1N1 influenza treated lungs (12 dpi) ,each were picked for whole genome microarray analysis
 
Contributor(s) Kumar PA, Hu Y, Yamamoto Y, Hoe NB, Wei TS, Mu D, Sun Y, Joo LS, Daghers R, Zielonka E, Wang DY, Chow VT, Crum CP, Xian W, McKeon F
Citation(s) 22036562
Submission date Oct 04, 2011
Last update date Mar 06, 2018
Contact name Frank Daniel McKeon
E-mail(s) mckeonf@gis.a-star.edu.sg, Wa.Xian_imb.a-star.edu.sg
Organization name Genome Institute of Singapore
Department Stem cell and Developmental Biology 7
Street address 60 Biopolis street
City Singapore
ZIP/Postal code 138672
Country Singapore
 
Platforms (1)
GPL6096 [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [transcript (gene) version]
Samples (6)
GSM808076 colony control-1
GSM808077 colony control-2
GSM808078 colony control-3
This SubSeries is part of SuperSeries:
GSE32606 Distal airway stem cells yield alveoli in vitro and during lung regeneration following H1N1 influenza infection
Relations
BioProject PRJNA154451

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE32600_RAW.tar 125.0 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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