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| Status |
Public on Oct 11, 2012 |
| Title |
In utero allergen exposure reprograms primary developmental patterns of lung gene expression and influences respiratory phenotype in rat models of asthma susceptibility. |
| Organism |
Rattus norvegicus |
| Experiment type |
Expression profiling by array
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| Summary |
Transcriptome of whole lung of rat from 3 genetic strains, 3 postnatal time points and 2 exposures (saline versus ovalbumin) in (mainly) 4 replicate measurements per condition.
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| Overall design |
Total RNA obtained from whole lung of rat from 3 genetic strains, 3 postnatal time points and 2 exposures (saline versus ovalbumin) in (mainly) 4 replicate measurements per condition.
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| Contributor(s) |
Kho AT, Ponton A, Kaplan F |
| Citation(s) |
22983352 |
| Submission date |
Oct 05, 2011 |
| Last update date |
Jul 29, 2014 |
| Contact name |
Alvin T. Kho |
| E-mail(s) |
alvin_kho@hms.harvard.edu
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| Phone |
617-919-2182
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| Organization name |
Boston Children's Hospital
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| Department |
Informatics Program
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| Street address |
320 Longwood Avenue
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| City |
Boston |
| State/province |
MA |
| ZIP/Postal code |
02115 |
| Country |
USA |
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| Platforms (1) |
| GPL6101 |
Illumina ratRef-12 v1.0 expression beadchip |
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| Samples (71)
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| GSM808657 |
whole lung Lewis rat, age PN1, replicate a, in utero Saline-exposed |
| GSM808658 |
whole lung Lewis rat, age PN1, replicate b, in utero Saline-exposed |
| GSM808659 |
whole lung Lewis rat, age PN1, replicate c, in utero Saline-exposed |
| GSM808660 |
whole lung Lewis rat, age PN1, replicate d, in utero Saline-exposed |
| GSM808661 |
whole lung Fisher rat, age PN1, replicate a, in utero Saline-exposed |
| GSM808662 |
whole lung Fisher rat, age PN1, replicate b, in utero Saline-exposed |
| GSM808663 |
whole lung Fisher rat, age PN1, replicate c, in utero Saline-exposed |
| GSM808664 |
whole lung Brown Norway rat, age PN1, replicate a, in utero Saline-exposed |
| GSM808665 |
whole lung Brown Norway rat, age PN1, replicate b, in utero Saline-exposed |
| GSM808666 |
whole lung Brown Norway rat, age PN1, replicate c, in utero Saline-exposed |
| GSM808667 |
whole lung Brown Norway rat, age PN1, replicate d, in utero Saline-exposed |
| GSM808668 |
whole lung Lewis rat, age PN1, replicate a, in utero Ovalbumin-exposed |
| GSM808669 |
whole lung Lewis rat, age PN1, replicate b, in utero Ovalbumin-exposed |
| GSM808670 |
whole lung Lewis rat, age PN1, replicate c, in utero Ovalbumin-exposed |
| GSM808671 |
whole lung Lewis rat, age PN1, replicate d, in utero Ovalbumin-exposed |
| GSM808672 |
whole lung Fisher rat, age PN1, replicate a, in utero Ovalbumin-exposed |
| GSM808673 |
whole lung Fisher rat, age PN1, replicate b, in utero Ovalbumin-exposed |
| GSM808674 |
whole lung Fisher rat, age PN1, replicate c, in utero Ovalbumin-exposed |
| GSM808675 |
whole lung Fisher rat, age PN1, replicate d, in utero Ovalbumin-exposed |
| GSM808676 |
whole lung Brown Norway rat, age PN1, replicate a, in utero Ovalbumin-exposed |
| GSM808677 |
whole lung Brown Norway rat, age PN1, replicate b, in utero Ovalbumin-exposed |
| GSM808678 |
whole lung Brown Norway rat, age PN1, replicate c, in utero Ovalbumin-exposed |
| GSM808679 |
whole lung Brown Norway rat, age PN1, replicate d, in utero Ovalbumin-exposed |
| GSM808680 |
whole lung Lewis rat, age PN7, replicate a, in utero Saline-exposed |
| GSM808681 |
whole lung Lewis rat, age PN7, replicate b, in utero Saline-exposed |
| GSM808682 |
whole lung Lewis rat, age PN7, replicate c, in utero Saline-exposed |
| GSM808683 |
whole lung Lewis rat, age PN7, replicate d, in utero Saline-exposed |
| GSM808684 |
whole lung Fisher rat, age PN7, replicate a, in utero Saline-exposed |
| GSM808685 |
whole lung Fisher rat, age PN7, replicate b, in utero Saline-exposed |
| GSM808686 |
whole lung Fisher rat, age PN7, replicate c, in utero Saline-exposed |
| GSM808687 |
whole lung Brown Norway rat, age PN7, replicate a, in utero Saline-exposed |
| GSM808688 |
whole lung Brown Norway rat, age PN7, replicate b, in utero Saline-exposed |
| GSM808689 |
whole lung Brown Norway rat, age PN7, replicate c, in utero Saline-exposed |
| GSM808690 |
whole lung Brown Norway rat, age PN7, replicate d, in utero Saline-exposed |
| GSM808691 |
whole lung Lewis rat, age PN7, replicate a, in utero Ovalbumin-exposed |
| GSM808692 |
whole lung Lewis rat, age PN7, replicate b, in utero Ovalbumin-exposed |
| GSM808693 |
whole lung Lewis rat, age PN7, replicate c, in utero Ovalbumin-exposed |
| GSM808694 |
whole lung Lewis rat, age PN7, replicate d, in utero Ovalbumin-exposed |
| GSM808695 |
whole lung Fisher rat, age PN7, replicate a, in utero Ovalbumin-exposed |
| GSM808696 |
whole lung Fisher rat, age PN7, replicate b, in utero Ovalbumin-exposed |
| GSM808697 |
whole lung Fisher rat, age PN7, replicate c, in utero Ovalbumin-exposed |
| GSM808698 |
whole lung Fisher rat, age PN7, replicate d, in utero Ovalbumin-exposed |
| GSM808699 |
whole lung Brown Norway rat, age PN7, replicate a, in utero Ovalbumin-exposed |
| GSM808700 |
whole lung Brown Norway rat, age PN7, replicate b, in utero Ovalbumin-exposed |
| GSM808701 |
whole lung Brown Norway rat, age PN7, replicate c, in utero Ovalbumin-exposed |
| GSM808702 |
whole lung Brown Norway rat, age PN7, replicate d, in utero Ovalbumin-exposed |
| GSM808703 |
whole lung Lewis rat, age PN14, replicate a, in utero Saline-exposed |
| GSM808704 |
whole lung Lewis rat, age PN14, replicate b, in utero Saline-exposed |
| GSM808705 |
whole lung Lewis rat, age PN14, replicate c, in utero Saline-exposed |
| GSM808706 |
whole lung Lewis rat, age PN14, replicate d, in utero Saline-exposed |
| GSM808707 |
whole lung Fisher rat, age PN14, replicate a, in utero Saline-exposed |
| GSM808708 |
whole lung Fisher rat, age PN14, replicate b, in utero Saline-exposed |
| GSM808709 |
whole lung Fisher rat, age PN14, replicate c, in utero Saline-exposed |
| GSM808710 |
whole lung Fisher rat, age PN14, replicate d, in utero Saline-exposed |
| GSM808711 |
whole lung Brown Norway rat, age PN14, replicate a, in utero Saline-exposed |
| GSM808712 |
whole lung Brown Norway rat, age PN14, replicate b, in utero Saline-exposed |
| GSM808713 |
whole lung Brown Norway rat, age PN14, replicate c, in utero Saline-exposed |
| GSM808714 |
whole lung Brown Norway rat, age PN14, replicate d, in utero Saline-exposed |
| GSM808715 |
whole lung Lewis rat, age PN14, replicate a, in utero Ovalbumin-exposed |
| GSM808716 |
whole lung Lewis rat, age PN14, replicate b, in utero Ovalbumin-exposed |
| GSM808717 |
whole lung Lewis rat, age PN14, replicate c, in utero Ovalbumin-exposed |
| GSM808718 |
whole lung Fisher rat, age PN14, replicate a, in utero Ovalbumin-exposed |
| GSM808719 |
whole lung Fisher rat, age PN14, replicate b, in utero Ovalbumin-exposed |
| GSM808720 |
whole lung Fisher rat, age PN14, replicate c, in utero Ovalbumin-exposed |
| GSM808721 |
whole lung Brown Norway rat, age PN14, replicate a, in utero Ovalbumin-exposed |
| GSM808722 |
whole lung Brown Norway rat, age PN14, replicate b, in utero Ovalbumin-exposed |
| GSM808723 |
whole lung Brown Norway rat, age PN14, replicate c, in utero Ovalbumin-exposed |
| GSM808724 |
whole lung Brown Norway rat, age PN14, replicate d, in utero Ovalbumin-exposed |
| GSM808725 |
whole lung Fisher rat, age PN14, replicate d, in utero Ovalbumin-exposed |
| GSM808726 |
whole lung Fisher rat, age PN1, replicate d, in utero Saline-exposed |
| GSM808727 |
whole lung Lewis rat, age PN14, replicate d, in utero Ovalbumin-exposed |
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| Relations |
| BioProject |
PRJNA147139 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE32622_RAW.tar |
2.8 Mb |
(http)(custom) |
TAR |
| GSE32622_non-normalized.txt.gz |
18.5 Mb |
(ftp)(http) |
TXT |
| Processed data included within Sample table |
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