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Series GSE33093

Query DataSets for GSE33093

Status

Public on Nov 05, 2011

Title

Meta-analysis of Clear Cell Renal Cell Carcinoma Gene Expression Defines a Variant Subgroup and Identifies Gender Influences on Tumor Biology

Organism

Homo sapiens

Experiment type

Expression profiling by array
Third-party reanalysis

Summary

Clear cell renal cell carcinoma comprises two dominant subtypes, ccA and ccB, with gender disparity providing additional disease information. A third minor subgroup has distinct expression profiles consistent with von Hippel-Lindau wild type status and displays variant histology features.

Overall design

44 new tumor samples and six large, publicly available, ccRCC gene expression databases were identified that cumulatively provided data for 480 tumors for metaanalysis via meta-array compilation.

Contributor(s)

Brannon AR, Haake SM, Hacker KE, Pruthi R, Wallen E, Nielsen ME, Rathmell WK

Citation(s)

22030119

Submission date

Oct 19, 2011

Last update date

Feb 22, 2018

Contact name

Kimryn Rathmell

E-mail(s)

kimryn.rathmell@vanderbilt.edu

Organization name

Vanderbilt

Department

Medicine

Lab

Rathmell

Street address

2220 Pierce Ave

City

Nashville

State/province

ZIP/Postal code

37232

Country

USA

Platforms (1)

GPL4133

Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)

Samples (44)

More...

GSM820734	F1
GSM820735	F6
GSM820736	G4

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BioProject

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE33093_RAW.tar	642.2 Mb	(http)(custom)	TAR (of TXT)
GSE33093_reanalysis.txt.gz	8.6 Mb	(ftp)(http)	TXT
Processed data are available on Series record