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Series GSE33142 Query DataSets for GSE33142
Status Public on Nov 01, 2011
Title ICL002: Time course of Calu-3 cells infected with Influenza A/VN/1203/04
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Purpose of experiment was to perform transcriptomics on Calu- 3 cells infected with Influenza A/VN/1203/04.
 
Overall design Calu-3 cells were infected with Influenza A/VN/1203/04, at MOI of 1.0. Cells samples were collected at 0, 3, 7, 12, 18, and 24 h post infection. Each infected sample was done in duplicate. (Duplicates are defined as 2 different wells, plated at the same time using the same cell stock for all replicates.)There is one time-matched mock for each time point from the same cell stock as rest of samples. Culture medium (the same as what the virus stock is in) was used for the mock infections.
The NIAID Systems Virology Center
 
Contributor(s) Bankhead A, Chang J, Eisfeld AJ, Katze M, Kawaoka Y, McWeeney S
Citation(s) 22074594
Submission date Oct 21, 2011
Last update date Feb 22, 2018
Contact name Michael Katze
E-mail(s) data@viromics.washington.edu
Organization name University of Washington
Department Microbiology
Lab Michael G. Katze, Ph.D
Street address Rosen Building 960 Republican St.
City Seattle
State/province WA
ZIP/Postal code 98109-4325
Country USA
 
Platforms (1)
GPL4133 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
Samples (18)
GSM820778 1203-1 24hr
GSM820779 1203-2 3hr
GSM820780 1203-1 12hr
Relations
BioProject PRJNA149391

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE33142_RAW.tar 167.3 Mb (http)(custom) TAR (of TXT)
GSE33142_marray_matrix_readme.txt 280 b (ftp)(http) TXT
GSE33142_normalized_array_ICL002.txt.gz 4.5 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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