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Series GSE33218 Query DataSets for GSE33218
Status Public on Oct 21, 2013
Title Identification of dysregulated genes in 3D culture of BRIP1 knockdown cells
Organism Homo sapiens
Experiment type Expression profiling by array
Summary To identify down-stream target genes of BRIP1 during acinar morphogenesis of human mammary epithelial cells, we carried out microarray analysis of BRIP1 knockdown cells.
 
Overall design Changes in gene expression in 3D culture of non-target and BRIP1 shRNA-transduced cells were analyzed. Samples were harvested from three different clones of non-target and BRIP1 shRNA-transduced cells at three time points, 4, 8, and 12 days, after cell seeding in Matrigel.
 
Contributor(s) DAINO K, IMAOKA T, MORIOKA T, IIZUKA D, NISHIMURA M, SHIMADA Y
Citation(s) 24040146
Submission date Oct 25, 2011
Last update date Feb 07, 2020
Contact name Kazuhiro DAINO
E-mail(s) daino.kazuhiro@qst.go.jp
Organization name National Institutes for Quantum and Radiological Science and Technology
Street address 4-9-1 Anagawa, Inage-ku
City Chiba
ZIP/Postal code 263-8555
Country Japan
 
Platforms (1)
GPL6480 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Probe Name version)
Samples (18)
GSM822402 Control_day4_rep1
GSM822403 Control_day4_rep2
GSM822404 Control_day4_rep3
Relations
BioProject PRJNA149449

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE33218_RAW.tar 39.2 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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