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Series GSE33227 Query DataSets for GSE33227
Status Public on Aug 24, 2013
Title Genome-wide maps of chromatin state in C2C12 myoblast cells and myotubes.
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We did ChIP-seq with anti- H3K4me3, H3K4me1, H3K4me2, H3K27me3, H3K27ac, and H3K36me3 antibodies in both C2C12 myoblasts and myotubes
 
Overall design Examination of 6 different histone modifications in 2 cell types.
 
Contributor(s) Mikkelsen TS
Citation(s) 24714595
Submission date Oct 25, 2011
Last update date May 15, 2019
Contact name Lin Jiang
E-mail(s) lin.jiang@imbim.uu.se
Phone +46 18 471 4383
Fax +46 18 471 4673
Organization name Uppsala University
Department Department Medical Biochemistry and Microbiology
Lab Functional Genetics
Street address Husargatan 3, Box 582
City Uppsala
ZIP/Postal code 75237
Country Sweden
 
Platforms (1)
GPL9185 Illumina Genome Analyzer (Mus musculus)
Samples (12)
GSM822510 H3K4me3_ChIPSeq_mb
GSM822511 H3K4me2_ChIPSeq_mb
GSM822512 H3K4me1_ChIPSeq_mb
Relations
SRA SRP009088
BioProject PRJNA149161

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE33227_RAW.tar 385.0 Mb (http)(custom) TAR (of BED)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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