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Series GSE33264 Query DataSets for GSE33264
Status Public on Nov 01, 2011
Title TCL001: Calu-3 cells treated with either IFN alpha or gamma
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Purpose of experiment was to compare transcriptomics of Calu-3 cells treated with either INF alpha or gamma.
 
Overall design Calu-3 cells were treated with 1000 Units/ml of INFa (Sigma I4276) or 500 Units/ml of IFN γ (Sigma I3265). Cells were collected for RNA isolation at 0, 3, 6, and 18 or 22 h post treatment. Each treated sample was done in triplicate. (Triplicates are defined as 3 different wells, plated at the same time using the same cell stock for all replicates.)There are triplicate time-matched mock for each time point from the same cell stock as rest of samples.
The NIAID Systems Virology Center
 
Contributor(s) Bankhead A, Chang J, Katze M, McWeeney S
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Oct 26, 2011
Last update date Feb 22, 2018
Contact name Michael Katze
E-mail(s) data@viromics.washington.edu
Organization name University of Washington
Department Microbiology
Lab Michael G. Katze, Ph.D
Street address Rosen Building 960 Republican St.
City Seattle
State/province WA
ZIP/Postal code 98109-4325
Country USA
 
Platforms (1)
GPL4133 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
Samples (49)
GSM823032 TCL001 IFNa 0h 1
GSM823033 TCL001 IFNa 0h 2
GSM823034 TCL001 IFNa 0h 3
Relations
BioProject PRJNA149053

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE33264_RAW.tar 443.3 Mb (http)(custom) TAR (of TXT)
GSE33264_marray_matrix_readme.txt 280 b (ftp)(http) TXT
GSE33264_normalized_reads.txt.gz 10.8 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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