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Series GSE33967 Query DataSets for GSE33967
Status Public on Aug 01, 2012
Title MondoA is highly expressed in acute lymphoblastic leukemia and modulates metabolism, differentiation and survival
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Acute lymphoblastic leukemia (ALL) is the most common childhood cancer. To identify novel candidates for targeted treatment of childhood ALL, we performed a comprehensive transcriptome analysis yielding a set of genes specifically overexpressed in ALL. Among them we identified MondoA - a transcription factor regulating glycolysis in response to glucose availability. Here, we confirm that MondoA is highly overexpressed ALL, whereas the MondoA paralog, MondoB, is not expressed. Expression studies revealed that MondoA is not regulated by glucose availability in leukemia cells, but by the presence of lactate. An in silico MondoA promoter analysis identified two methylation-prone CpG-islands and four conserved binding sites for runt-related transcription factor 1 (RUNX1). In fact, MondoA and RUNX1 are significantly coexpressed in leukemia and experimental blockage of DNA methylation leads to a further induction of MondoA. In addition, using microarray profiling, gene-set enrichment analysis and RNA interference we provide for the first time evidence that MondoA expression not only increases glucose catabolism, but also maintains a more immature ALL phenotype, which is associated with enhanced survival and clonogenicity of leukemia cells. These data hint to an important contribution of MondoA to leukemia aggressiveness validating MondoA as an attractive candidate for targeted treatment of ALL.
 
Overall design Two nonsense shRNA expressing control Nalm6 clones and three MondoA shRNA expressing Nalm6 clones were subjected to microarray analysis.
 
Contributor(s) Wernicke CM, Grunewald TG, Richter GH, Prazeres da Costa O, Burdach S
Citation(s) 22748921
Submission date Nov 28, 2011
Last update date Jul 26, 2018
Contact name Olivia Prazeres da Costa
E-mail(s) olivia.p.dacosta@googlemail.com
Phone 00498941404149
Organization name Technische Universität München
Department Medical Microbiology, Immunology and Hygiene
Street address Trogerstr. 30
City München
State/province Bavaria
ZIP/Postal code 81675
Country Germany
 
Platforms (1)
GPL6244 [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version]
Samples (5)
GSM839748 Nalm6_control_1
GSM839749 Nalm6_control_2
GSM839750 Nalm6_MondoA_knockdown_1
Relations
BioProject PRJNA150519

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE33967_RAW.tar 19.2 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

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