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| Status |
Public on Dec 02, 2011 |
| Title |
Expression data from C. elegans |
| Organism |
Caenorhabditis elegans |
| Experiment type |
Expression profiling by array
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| Summary |
We exposed wild-type Vibrio cholerae E7496, multiple Vibrio cholerae virulence factor deleted genes with intact hemolysin A gene [CVD109] and without hemolysin A gene [CVD110] in E7946, and E.coli OP50 to wild-type C.elegans N2 for 18 hours. We used microarrays to detail the global gene expression and identified distinct classes of up-regulated and down-regulated genes during this process.
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| Overall design |
C. elegans were exposed to Vibrio cholerae and E.coli then hybridization on Affymetrix microarray chips.
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| Contributor(s) |
Sahu SN, Patel I, Cinar HN |
| Citation(s) |
22675448 |
| Submission date |
Nov 29, 2011 |
| Last update date |
Jul 06, 2016 |
| Contact name |
Jada Lewis |
| E-mail(s) |
jada.lewis@fda.hhs.gov
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| Organization name |
FDA
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| Street address |
8301 Muirkirk Road
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| City |
Laurel |
| State/province |
MD |
| ZIP/Postal code |
20708 |
| Country |
USA |
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| Platforms (1) |
| GPL200 |
[Celegans] Affymetrix C. elegans Genome Array |
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| Samples (15)
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| GSM840594 |
N2 exposed to CVD109, biological rep1 |
| GSM840595 |
N2 exposed to CVD109, biological rep2 |
| GSM840596 |
N2 exposed to CVD109, biological rep3 |
| GSM840597 |
N2 exposed to CVD110, biological rep1 |
| GSM840598 |
N2 exposed to CVD110, biological rep2 |
| GSM840599 |
N2 exposed to CVD110, biological rep3 |
| GSM840600 |
N2 exposed to hemolysin mutant of E7946, biological rep1 |
| GSM840601 |
N2 exposed to hemolysin mutant of E7946, biological rep2 |
| GSM840602 |
N2 exposed to hemolysin mutant of E7946, biological rep3 |
| GSM840603 |
N2 exposed to E7946, biological rep1 |
| GSM840604 |
N2 exposed to E7946, biological rep2 |
| GSM840605 |
N2 exposed to E7946, biological rep3 |
| GSM840606 |
N2 exposed to OP50(E.coli), biological rep1 |
| GSM840607 |
N2 exposed to OP50(E.coli), biological rep2 |
| GSM840608 |
N2 exposed to OP50(E.coli), biological rep3 |
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| Relations |
| BioProject |
PRJNA148067 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE34026_RAW.tar |
32.9 Mb |
(http)(custom) |
TAR (of CEL, CHP) |
| Processed data included within Sample table |
| Processed data provided as supplementary file |
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