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Series GSE34035 Query DataSets for GSE34035
Status Public on Dec 01, 2011
Title Epigenome analysis of saliva samples from alcohol users
Organism Homo sapiens
Experiment type Methylation profiling by array
Summary Genome wide DNA methylation profiling of saliva DNA from 197 alcohol dependent subjects. The Illumina Infinium 27k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 CpGs in saliva samples.
 
Overall design Bisulphite converted DNA were hybridised to the Illumina Infinium 27k Human Methylation Beadchip v1.2
 
Contributor(s) Hutchison K
Citation(s) 20386599
Submission date Nov 30, 2011
Last update date Jan 02, 2015
Contact name Jingyu Liu
E-mail(s) jliu@mrn.org
Phone 505-504-8066
Organization name Mind Research Network
Street address 1101 Yale Blvd.
City Albuquerque
State/province NM
ZIP/Postal code 87106
Country USA
 
Platforms (1)
GPL8490 Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2)
Samples (197)
GSM840660 Illumina_Drinker_1
GSM840661 Illumina_Drinker_2
GSM840662 Illumina_Drinker_3
Relations
BioProject PRJNA148079

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE34035_RAW.tar 5.8 Mb (http)(custom) TAR
GSE34035_methylated_unmethylated_signals.txt.gz 29.5 Mb (ftp)(http) TXT
Processed data included within Sample table

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