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Series GSE34131 Query DataSets for GSE34131
Status Public on Nov 01, 2012
Title Gene expression profile of peripheral blood leukocytes of 60Co gamma-ray accidently-irradiated persons
Organism Homo sapiens
Experiment type Expression profiling by array
Summary In order to identified as candidate biomarkers for early diagonosis or as therapeutic targets in late damages of ionizing radiation, gene expression profile was analyzed in the peripheral blood of three 60Co γ-ray accidently-exposed persons. The results showed that there were 285 up-regulated and 446 down-regulated genes in irradiated samples compared with control samples.
The large majority of those differentially expressed genes encode proteins that are associated with immune response, inflammation, cell structure, oxidative stress, neuro-hormone regulation, reproduction, susceptibility of psychiatric disorders, and transcriptional regulators.
The expressions of IL3, KDR, CEACAM8 and OSM were validated by real-time RT-PCR method. The findings of our study should help us understanding the molecular mechanisms underlying the late effects of ionizing radiation and to develop better diagonostic and therapeutic strategies for those damages.
 
Overall design Fresh blood samples were collected from three 60Coγ-Ray accidentally-exposed persons(3 years post irradiation) and three non-irradiated healthy donors. Leucocytes cells were isolated and total RNA was extracted. Four RNA samples, from three accidently-exposed persons and a RNA mixture extracted from a combination of three healthy donors` leucocytes (ratio 1:1:1, each 3.3×106 cells) in EL buffer, were subjected to Agilent gene expression microarray assay.
 
Contributor(s) Chi C, Wei J, Guo J, Li S
Citation(s) 23559597
Submission date Dec 04, 2011
Last update date Feb 22, 2018
Contact name Cuiping CHI
E-mail(s) chicuiping@gmail.com
Organization name China Institute for Radiation Protection
Department Radiation Medicine
Street address Xue Fu Street No. 102
City Taiyuan City
State/province Shan Xi Province
ZIP/Postal code 030006
Country China
 
Platforms (1)
GPL4133 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
Samples (4)
GSM842244 Blood_accidentlyexposed_2.3Gy_1
GSM842245 Blood_accidentlyexposed_1.7Gy_2
GSM842246 Blood_accidentlyexposed_1.3Gy_3
Relations
BioProject PRJNA149859

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE34131_CV.txt.gz 120 b (ftp)(http) TXT
GSE34131_RAW.tar 43.1 Mb (http)(custom) TAR (of TXT)
GSE34131_Step1Normalization.txt.gz 3.5 Mb (ftp)(http) TXT
GSE34131_Step2probefiltering.txt.gz 1.1 Mb (ftp)(http) TXT
GSE34131_Step3log2fold.txt.gz 6.4 Mb (ftp)(http) TXT
GSE34131_Step4DifferentialEpression.txt.gz 82.1 Kb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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