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| Status |
Public on Dec 01, 2005 |
| Title |
Diurnal gene expression in rosette leaves of the phosphoglucomutase mutant (Col-0) |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by array
|
| Summary |
How do transcript levels of leaf-expressed genes change in a normal day-night cycle of the phosphoglucomutase (pgm) mutant? The interest is in genes that are regulated by the circadian clock and the diurnal component (i.e. light, metabolite changes). Plants were grown on soil in a 12/12 h light/dark rhythm at 20°C day and night. 5 weeks after germination the rosettes of the non-flowering plants were harvested, 15 plants per sample. Plants were harvested in series at 6 times every 4 hours, beginning with the end of the night (still in darkness).
Keywords: repeat
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| |
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| Overall design |
A diurnal time series (8 times) was analyzed.
|
| Web link |
http://www.mpimp-golm.mpg.de
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| |
|
| Contributor(s) |
Bläsing OE, Stitt M |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Oct 07, 2005 |
| Last update date |
Aug 28, 2018 |
| Contact name |
Oliver E Bläsing |
| E-mail(s) |
blaesing@mpimp-golm.mpg.de
|
| Phone |
+49 (0) 331 5678114
|
| Fax |
+49 (0) 331 5678 134
|
| Organization name |
Max-Planck-Institut Molekulare Pflanzenphysiologie
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| Department |
Abt. Stitt
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| Lab |
Stitt
|
| Street address |
Am Mühlenberg 1
|
| City |
Potsdam-Golm |
| ZIP/Postal code |
D-14476 |
| Country |
Germany |
| |
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| Platforms (1) |
| GPL198 |
[ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array |
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| Samples (8)
|
| GSM77181 |
00h pgm (Col-0) mutant replicate A |
| GSM77182 |
00h pgm (Col-0) mutant replicate B |
| GSM77183 |
04h pgm (Col-0) mutant replicate A |
| GSM77184 |
08h pgm (Col-0) mutant replicate A |
| GSM77185 |
12h pgm (Col-0) mutant replicate A |
| GSM77186 |
12h pgm (Col-0) mutant replicate B |
| GSM77187 |
16h pgm (Col-0) mutant replicate A |
| GSM77188 |
20h pgm (Col-0) mutant replicate A |
|
| Relations |
| BioProject |
PRJNA93457 |
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