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Series GSE34267 Query DataSets for GSE34267
Status Public on Jan 04, 2012
Title Acute depletion of Tet1-dependent 5-hydroxymethylcytosine levels impairs LIF/Stat3 signaling and results in loss of embryonic stem cell identity
Organism Mus musculus
Experiment type Expression profiling by array
Methylation profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series

 
Contributor(s) Jothi R, Hu G, Freudenberg J
Citation(s) 22210859
Submission date Dec 08, 2011
Last update date May 15, 2019
Contact name Raja Jothi
E-mail(s) jothi@mail.nih.gov
Organization name National Institutes of Health
Department National Institute of Environmental Health Sciences
Lab Systems Biology
Street address 111 TW Alexander Drive; A314
City RTP
State/province NC
ZIP/Postal code 27709
Country USA
 
Platforms (2)
GPL9250 Illumina Genome Analyzer II (Mus musculus)
GPL14661 [Mouse430_2_Mm_EntrezG] Affymetrix GeneChip Mouse Genome 430 2.0 Array [Brainarray Version 13]
Samples (12)
GSM846063 Control ES cells 96hr, rep1
GSM846064 Control ES cells 96hr, rep2
GSM846065 Tet1-KD ES cells siRNA #1 96hr, rep1
This SuperSeries is composed of the following SubSeries:
GSE34886 Acute depletion of Tet1-dependent 5-hydroxymethylcytosine levels impairs LIF/Stat3 signaling and results in loss of embryonic stem cell identity [expression profiling]
GSE34887 Acute depletion of Tet1-dependent 5-hydroxymethylcytosine levels impairs LIF/Stat3 signaling and results in loss of embryonic stem cell identity [MRE-seq]
Relations
BioProject PRJNA149737

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE34267_RAW.tar 560.8 Mb (http)(custom) TAR (of BED, CEL, WIG)

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